Zach Faber

Zach Faber

Lab Manager

Case Western Reserve University

Department of Genetics & Genome Sciences

I am interested in cancer genomics, high-throughput screening, and developing CRISPR-based technologies.

As a graduate student at Tulane I studied genomic instability in the context of retrotransposons. To limit the genotoxic effect of retrotransposition, cells utilize their cellular DNA repair machinery. As a postdoc at St. Jude Children’s Research Hospital I examined the genomic landscape of core-binding factor acute myeloid leukemia as part of the Pediatric Cancer Genome Project. After coming to CWRU my focus switched from the genome to the eipgenome, where I studied changes in the enhancer landscape in cancer. Most recently I was part of a team that described the epigenetic content of extrachromosomal DNAs (ecDNAs) in glioblastoma. We showed that coamplified noncoding DNA on ecDNAs contain functional enhancers that interact with the amplified oncogene. Silencing of the coamplifed enhancers resulted in decrease in cellular fitness and could represent a unique dependency in ecDNA containing tumors.

In the Cancer Evolution Lab I am extending the Tuba-seq technology to better model genetic heterogeneity within tumors.

I came to CWRU in the fall of 2016 and joined the Cancer Evolution Lab in early 2022.


  • PhD in Molecular and Cellular Biology, 2012

    Tulane University

  • B.A. in Biology, 2004

    St. John's University (MN)